Marie Curie Industry-Academia Pathways and Partnerships (IAPP)

Klein J, Lacroix C, Caubet C, Siwy J, Zürbig P, Dakna M, Muller F, Breuil B, Stalmach A, Mullen W, Mischak H, Bandin F, Monsarrat B, Bascands JL, Decramer S,
Schanstra JP.
Fetal Urinary Peptides to Predict Postnatal Outcome of Renal Disease in Fetuses with Posterior Urethral Valves (PUV).
Sci Transl Med. 2013 Aug 14;5(198):198ra106. doi: 10.1126/scitranslmed.3005807. PubMed PMID: 23946195.

Albalat A, Stalmach A, Bitsika V, Siwy J, Schanstra JP, Petropoulos AD, Vlahou, A, Jankowski J, Persson F, Rossing P, Jaskolla TW, Mischak H, Husi H.
Improving peptide relative quantification in MALDI-TOF MS for biomarker assessment.
Proteomics. 2013 Aug 14. doi: 10.1002/pmic.201300100. [Epub ahead of print]
PubMed PMID: 23943474.

Moulos P, Klein J, Jupp S, Stevens R, Bascands JL, Schanstra JP.
The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases.
BMC Bioinformatics. 2013 Jul 24;14:235. doi: 10.1186/1471-2105-14-235.
PubMed PMID: 23883183; PubMed Central PMCID: PMC3725151.

Mischak H, Vlahou A, Ioannidis JP.

Technical aspects and inter-laboratory variability in native peptide profiling: the CE-MS experience.
Clin Biochem. 2013 Apr;46(6):432-43. doi: 10.1016/j.clinbiochem.2012.09.025. Epub 2012 Oct 4.

Stalmach A, Albalat A, Mullen W, Mischak H.
Recent advances in capillary electrophoresis coupled to mass spectrometry for clinical proteomic applications.
Electrophoresis. 2013 Mar 20. doi: 10.1002/elps.201200708. [Epub ahead of print]

Mischak H.
How to get proteomics to the clinic? Issues in clinical proteomics, exemplified by CE-MS.
Proteomics Clin Appl. 2012 Oct;6(9-10):437-42. doi: 10.1002/prca.201200027. Epub 2012 Sep 24.

Klein J, Eales J, Zürbig P, Vlahou A, Mischak H, Stevens R.
Proteasix: A tool for automated and large-scale prediction of proteases involved in naturally occurring peptide generation.
Proteomics. 2013 Apr;13(7):1077-82. doi: 10.1002/pmic.201200493. Epub 2013 Feb 26.

Molin L, Seraglia R, Lapolla A, Ragazzi E, Gonzalez J, Vlahou A, Schanstra JP, Albalat A, Dakna M, Siwy J, Jankowski J, Bitsika V, Mischak H, Zürbig P, Traldi P.
A comparison between MALDI-MS and CE-MS data for biomarker assessment in chronic kidney diseases.
J Proteomics. 2012 Oct 22;75(18):5888-97. doi: 10.1016/j.jprot.2012.07.024. Epub 2012 Jul 26.

Klein, Jupp, Moulos, Fernandez, Buffin-Meyer, Casemayou, Chaaya, Charonis, Bascands, Stevens, and Schanstra.
The KUPKB: a novel Web application to access multiomics data on kidney disease.

FASEB J. 2012 May;26(5):2145-53. doi: 10.1096/fj.11-194381. Epub 2012 Feb 17.

Mullen., Albalat, Gonzalez, Zerefos, Siwy, Franke, Mischak
Performance of different
separation methods interfaced in the same MS-reflection TOF: comparison of performance between CE versus HPLC.
Electrophoresis. 2012 Feb;33(4):567-74. doi: 10.1002/elps.201100415.